Tute Genomics Annotation

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Tute Genomics has made available to the community annotations for all hg19 SNPs as a BigQuery table.

Google Cloud Platform data locations

To make use of this on your own data:

  1. First, load your data into Google Genomics and export your variants to BigQuery. See Load Genomic Variants for more detail as to how to do this.
  2. Copy and modify one of the queries in https://github.com/googlegenomics/bigquery-examples/tree/master/platinumGenomes so that it will perform a JOIN command against your table.
  3. Run the revised query with BigQuery to join the Tute table with your variants and materialize the result to a new table. Notice in the screenshot below the destination table and ‘Allow Large Results’ is checked.
../../_images/TuteAnnotation.png

Have feedback or corrections? All improvements to these docs are welcome! You can click on the “Edit on GitHub” link at the top right corner of this page or file an issue.

Need more help? Please see https://cloud.google.com/genomics/support.